BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004B04SP1|AL425225
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1605 1588 0.0
>3x_Contig1605
Length = 12373
Score = 1588 bits (795), Expect = 0.0
Identities = 840/859 (97%), Gaps = 2/859 (0%)
Strand = Plus / Plus
Query: 1 atacgggagggcatgttgtgatgaattattggatcgctaaatgccgtgcaatcatgaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699 atacgggagggcatgttgtgatgaattattggatcgctaaatgccgtgcaatcatgaata 10758
Query: 61 gcaacatcaaaacgatcccgacccatgattcaattaccagactggatgcattggccaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10759 gcaacatcaaaacgatcccgacccatgattcaattaccagactggatgcattggccaaaa 10818
Query: 121 gatgtatttgggataagcgaggtatcaaatggaactgttggttagaatattctgaataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10819 gatgtatttgggataagcgaggtatcaaatggaactgttggttagaatattctgaataca 10878
Query: 181 ggaatgtattcagaaggcttgggtcggtaccgtatcaatccaattctagagaccaattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10879 ggaatgtattcagaaggcttgggtcggtaccgtatcaatccaattctagagaccaattgg 10938
Query: 241 ataaacacgaagttgctaaaagttcaaagaaaaaagtcaaatacctaaagaagcttaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10939 ataaacacgaagttgctaaaagttcaaagaaaaaagtcaaatacctaaagaagcttaaag 10998
Query: 301 agacagctatacggaataaacagtctcacgacgcagcttacaggaatgattatatattcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10999 agacagctatacggaataaacagtctcacgacgcagcttacaggaatgattat-tattcg 11057
Query: 361 gcattaaagaatgatcttatcaatagaggaataattgaagaacaagccaaatgatacgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11058 gcattaaagaatgatcttatcaatagaggaataattgaagaacaagccaaatgatacgag 11117
Query: 421 catgaaacgaaataaatatataatgacattatgatttatggttgatatagaaaaagttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11118 catgaaacgaaataaatatataatgacattatgatttatggttgatatagaaaaagttaa 11177
Query: 481 ttaataactgcttacctacatggacatatccatgtttcgtcccaattatatgattttttt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11178 ttaataactgcttacctacatggacatatccatgtttcgtcccaattatatgatttttat 11237
Query: 541 tctttgttggaaacatatcaaaagagttaggtcaaaa-atccttccagttgatcttacgt 599
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 11238 tctttgttggaaacatatcataagagttaggtcaaaatatccttccagttgatcttacgt 11297
Query: 600 ggcgttttggtgaaaacaamtgargaggwgctgtctgtagaagaaggcatawcctgggag 659
||||||||||||| ||||| ||| | || |||||||||||||||||||||| ||||||||
Sbjct: 11298 ggcgttttggtgataacaactgaggtggtgctgtctgtagaagaaggcatatcctgggag 11357
Query: 660 attrttrgcaacctttkgccaaataataaattwacttctgatagatcgactgctgtaagg 719
||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11358 attgttggcaacctttggccaaataataaattaacttctgatagatcgactgctgtaagg 11417
Query: 720 aagcctttagttttccagtaacttacaccaaggtataagatgatacccgcagtattcaat 779
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 11418 aagcctttagttttccagtaacttacaccaaggtataagatgatacccgcaggtatcaat 11477
Query: 780 atktacgcatcaacaaaatttttggcatcgaatggtttgaagtaagaccatccttgaacc 839
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11478 atgtacgcatcaacaaaatttttggcatcgaatggtttgaagtaagaccatccttgaacc 11537
Query: 840 agtcccaagaatatkttgg 858
|||||||||||||| ||||
Sbjct: 11538 agtcccaagaatatgttgg 11556
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7338
Number of Sequences: 1807
Number of extensions: 7338
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)